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发布日期:2014-06-09
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彭司华 副研究员


彭司华,男,1962年出生于湖南保靖县,博士,副研究员。先后毕业于东南大学,东北电力大学,浙江大学,分别获工学学士,硕士,博士学位。先后在浙江大学机械与能源工程学院,医学院病理学系任讲师,美国斯坦福大学(Stanford University)医学院外科系任访问副教授,美国韦恩州立大学 (Wayne State University)医学院分子医学与遗传学中心任Research Associate,现为上海海洋大学水产与生命学院生物科学系教师。先后任10余个SCI期刊审稿专家,现任3个生物信息学国际期刊编委。从事生物信息学,基因组学,机器学习研究工作,发表相关学术论文30余篇,SCI总引用460余次,单篇最高它引100余次,H指数为10.


学术兼职

EURASIP Journal on Bioinformatics and Systems Biology (Springer) 编委

Informatics in Medicine Unlocked (Elsevier) 编委

Computational Molecular Bioscience (Scientific Research Publishing) 编委

教学工作情况

《生物统计原理与应用》

主要研究方向

生物信息学,计算基因组学,机器学习在生物数据处理中的应用

主持和参与的科教项目

[1]上海海洋大学博士科研启动项目,二代测序数据分析软件集成系统开发, 在研, 主持。

[2]上海市科委自然科学基金面上项目,15ZR1420800, 高原鳅适应性分子进化研究, 2015/01-2017/12,在研, 主持。

[3]国家科技部十一五支撑计划项目子项目, 2009BA180B0, 代谢综合征早期识别与干预技术研究, 2009/1-2012/12,已结题, 主持。

[4]浙江省科技计划项目, 2012R10050-09,代谢综合征数据库和标本库建设,2012.1-2014.12,已结题, 主持。

[5]浙江省自然科学基金项目,Y2090081, 肥胖相关基因网络的构建及易感基因的筛查、2010/1-2011/12, 已结题, 主持。

发表的主要论文情况

[1]Xu QH, Zhang C, Zhang DS, Jiang HP, Peng SH, Liu Y, Zhao K, Wang CC, Chen LB: Analysis of the erythropoietin of a Tibetan Plateau schizothoracine fish (Gymnocypris dobula) reveals enhanced cytoprotection function in hypoxic environments. BMC Evol Biol. 2016, 16.

[2]Xu QH, Cai C, Hu XX, Liu Y, Guo YN, Hu P, Chen ZZ, Peng SH, Zhang DS, Jiang SW et al: Evolutionary suppression of erythropoiesis via the modulation of TGF-beta signalling in an Antarctic icefish. Mol Ecol. 2015, 24(18):4664-4678

[3]Sylvester KG, Ling XB, Liu GY-G, Kastenberg ZJ, Ji J, Hu Z, Wu S, Peng SH, Abdullah F, Brandt ML, Ehrenkranz RA, Harris MC, Lee TC, Simpson BJ, Bowers C, Moss RL. Urine protein biomarkers for the diagnosis and prognosis of necrotizing enterocolitis in infants. Journal of Pediatrics. 2014, 164:607

[4]Sylvester KG, Ling XB, Liu GY, Kastenberg ZJ, Ji J, Hu Z, Peng SH, Lau K, Abdullah F, Brandt ML, Ehrenkranz RA, Harris MC, Lee TC, Simpson J, Bowers C, Moss RL. A novel urine peptide biomarker-based algorithm for the prognosis of necrotising enterocolitis in human infants. Gut. 2014, 63:1284-1292

[5]Peng SH, Zhu Y, Lu B, Xu F, Li X, Lai M. TCF7L2 gene polymorphisms and type 2 diabetes risk: A comprehensive and updated meta-analysis involving 121 174 subjects. Mutagenesis. 2013, 28:25-37

[6]Ling XB, Kanegaye JT, Ji J, Peng SH, Sato Y, Tremoulet A, Burns JC, Cohen HJ. Point-of-care differentiation of kawasaki disease from other febrile illnesses. Journal of Pediatrics. 2013, 162:183-U219

[7]Li X, Peng SH. Identification of metastasis-associated genes in colorectal cancer through an integrated genomic and transcriptomic analysis. Chinese Journal of Cancer Research. 2013, 25:623-636

[8]Ling XB, Macaubas C, Alexander HC, Wen Q, Chen E, Peng SH, Sun Y, Deshpande C, Pan K-H, Lin R, Lih C-J, Chang S-YP, Lee T, Sandborg C, Begovich AB, Cohen SN, Mellins ED. Correlation analyses of clinical and molecular findings identify candidate biological pathways in systemic juvenile idiopathic arthritis. BMC Medicine. 2012, 10

[9]Li X, Peng SH, Chen J, Lu B, Zhang H, Lai M. Svm-t-rfe: A novel gene selection algorithm for identifying metastasis-related genes in colorectal cancer using gene expression profiles. Biochemical and Biophysical Research Communications. 2012, 419:148-153

[10]Peng SH, Zhu Y, Xu F, Ren X, Li X, Lai M. FTO gene polymorphisms and obesity risk: A meta-analysis. BMC Medicine. 2011, 9

[11]Peng SH, Lue B, Ruan W, Zhu Y, Sheng H, Lai M. Genetic polymorphisms and breast cancer risk: Evidence from meta-analyses, pooled analyses, and genome-wide association studies. Breast Cancer Research and Treatment. 2011, 127:309-324

[12]Ling XB, Lau K, Kanegaye JT, Pan Z, Peng SH, Ji J, Liu G, Sato Y, Yu TTS, Whitin JC, Schilling J, Burns JC, Cohen HJ. A diagnostic algorithm combining clinical and molecular data distinguishes kawasaki disease from other febrile illnesses. BMC Medicine. 2011, 9

[13]Li X, Chen J, Lue B, Peng SH, Desper R, Lai M. -8p12-23 and +20q are predictors of subtypes and metastatic pathways in colorectal cancer: Construction of tree models using comparative genomic hybridization data. Omics-a Journal of Integrative Biology. 2011, 15:37-47

[14]Peng X, Zeng X, Peng SH, Deng D, Zhang J. The association risk of male subfertility and testicular cancer: A systematic review. Plos One. 2009, 4

[15]Peng SH, Zeng X, Li X, Peng X, Chen L. Multi-class cancer classification through gene expression profiles: Microrna versus mrna. Journal of Genetics and Genomics. 2009, 36:409-416

[16]Peng SH, Liu X, Yu J, Peng X, Chen L. A gene selection software package for cancer classification. IEEE Press, 2009.

[17]Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng SH, Chen L. Characterization of micrornas in cephalochordates reveals a correlation between microrna repertoire homology and morphological similarity in chordate evolution. Evolution & Development. 2009, 11:41-49

[18]Dong H, Deng Y, Chen J, Wang S, Peng SH, Dai Ce, Fang Y, Shao J, Lou Y, Li D. An exploration of 3 '-end processing signals and their tissue distribution in oryza sativa. Gene. 2007, 389:107-113

[19]Liu JJ, Cutler G, Li WX, Pan Z, Peng SH, Hoey T, Chen LB, Ling XFB. Multiclass cancer classification and biomarker discovery using ga-based algorithms. Bioinformatics. 2005, 21:2691-2697

[20]Peng SH, Xu QH, Ling XB, Peng XN, Du W, Chen LB. Molecular classification of cancer types from microarray data using the combination of genetic algorithms and support vector machines. Febs Letters. 2003, 555:358-362

联系方式

地址:上海市浦东新区沪城环路999号 上海海洋大学水产与生命学院 A203

电话:021-61900491

E-mailshpeng@shou.edu.cn


20166月更新)